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RE: Sereno's (2005) new definitions
Tim Williams wrote-
Not so. You can run the Troodon formosus holotype premaxillary tooth in a
matrix as an OTU. In fact, it's easy to do such because there are so few
characters to code.
I see what you mean. Using that criterion, many nomina dubia could be put
through a matrix so long as at least one codeable character is discernable.
But it was my impression that a nomen dubium could not be used in a
phylogenetic analysis on account of the fact that it has no taxonomic
standing, and so cannot be a valid operational taxonomic unit. In other
words, the T in the OTU is missing - although as Mickey showed, you can
still carry out the O part. But I don't think it's worth the effort.
But a nomen dubium is just a specimen, an organism. So if we can run more
diagnosable specimens through phylogenetic analyses, why not less
diagnosable specimens? AMNH 460 has no taxonomic standing, yet Upchurch et
al. (2004) ran it as an OTU.
Putting a nomen dubium in a matrix is entirely artificial - and maybe a bad
thing to do if the resulting phylogeny is influenced by the inclusion of
nomina dubia.
A nomen dubium cannot influence a topology except to create a polytomy which
covers its potential placements. Only taxa with unique combinations of
characters can influence topologies, but nomina dubia by definition lack
those.
In other words, we could put a nomen dubium into a matrix - but why would
we need to? Why, when we could just replace the nomen dubium with an
unquestionably valid taxon?
To tell what the nomen dubium's phylogenetic relationships are, of course.
Ceratopsidae should be junked too, given that _Ceratops_ is probably a
nomen dubium (and unlike _Troodon_, we would be hard-pressed to find its
position in ceratopsian phylogeny given the _C. montanus_ type material).
The name Hadrosauridae is unhelpful, given the status of the _Hadrosaurus_
type specimen. If we are serious about erecting definitions that are
stable, then some time-honored traditions have to be compromised, ICZN or
no ICZN. Ceratopsidae could become Centrosauridae, and Hadrosauridae could
become Saurolophidae - but Ceratopsia and Hadrosauria would remain.
Why view -idae and -ia clades differently if we're ignoring the ICZN?
Mickey Mortimer