The main point is that the inability to use the neck as a snorkle in no way excludes semi-aquatic lifestyle from the list of plausible sauropod lifestyle choices. It is known that relative to metabolism, dive-time scales positively to mass. If a 1 ton croc can hold it's breath for 30-45 minutes, then a large sauropod might plausibly have gone much longer than an hour on stored O2...
Also, their ability to store and conserve O2 may have allowed them to deflate their lungs prior to submerging, reducing bouyancy to the point that walking on the bottom was practical.
During deep diving, the lungs of seals and sea lions are totally collapsed. Which is normal. They evolved that way.
One last question: Do penguin lungs collapse during dives? What role does their air sacs play during diving?
A decent test may be to study the morphology of the ribs for continuous submersers like aquatic species like sirenians and dolphins versus those of temporary submersers like hippos and crocs, and rare submersers like horses, etc., and determine the variabilities. The presence of dense bone to counteract bouyancy, rounded ribs to counter external pressure, a round thoracic cavity rather than "slab-sided" for equalization of pressure around the rib case, etc.
Cheers,
--Mike Habib